Package: occumb 1.1.0.9001

occumb: Site Occupancy Modeling for Environmental DNA Metabarcoding

Fits multispecies site occupancy models to environmental DNA metabarcoding data collected using spatially-replicated survey design. Model fitting results can be used to evaluate and compare the effectiveness of species detection to find an efficient survey design. Reference: Fukaya et al. (2022) <doi:10.1111/2041-210X.13732>.

Authors:Keiichi Fukaya [aut, cre], Ken Kellner [cph], Mika Takahashi [aut]

occumb_1.1.0.9001.tar.gz
occumb_1.1.0.9001.zip(r-4.5)occumb_1.1.0.9001.zip(r-4.4)occumb_1.1.0.9001.zip(r-4.3)
occumb_1.1.0.9001.tgz(r-4.4-any)occumb_1.1.0.9001.tgz(r-4.3-any)
occumb_1.1.0.9001.tar.gz(r-4.5-noble)occumb_1.1.0.9001.tar.gz(r-4.4-noble)
occumb_1.1.0.9001.tgz(r-4.4-emscripten)occumb_1.1.0.9001.tgz(r-4.3-emscripten)
occumb.pdf |occumb.html✨
occumb/json (API)
NEWS

Peer review:

Bug tracker:https://github.com/fukayak/occumb/issues

On CRAN:

12 exports 1.59 score 12 dependencies 7 scripts 284 downloads

Last updated 5 days agofrom:d969e4e8b1. Checks:OK: 7. Indexed: yes.

Exports:eval_util_Leval_util_Rget_post_samplesget_post_summarygoflist_cond_Llist_cond_RoccumboccumbDataplotpredictsummary

Dependencies:backportscheckmatecodacrayonevaluatehighrjagsUIknitrlatticerjagsxfunyaml